#SERUM SERIAL NUMBER .TXT CODE#
The source code of the GNPSExport tool in OpenMS is available at the BSD license. The source code of the GNPSExport module in MZmine is available at under the GNU General Public License. We also provide documentation, support, example files and additional information on the GNPS documentation website ( ). The workflow was written in Python (v3.7) and deployed with the ProteoSAFE workflow manager used by GNPS ( ).
#SERUM SERIAL NUMBER .TXT LICENSE#
It is released under the license of The Regents of the University of California San Diego and free for non-profit research ( ).
The workflow code is open source and available on GitHub ( ). The FBMN workflow is available as a web interface on the GNPS web platform ( ). Classical MN and FBMN jobs can be accessed at and, respectively. The MS acquisition method, data and parameters used for the processing of the serum analysis with the timsTOF mass spectrometer were deposited ( MSV000084402). The OpenMS and FBMN jobs are available at at, respectively. The LC–MS 2 data for the EDTA case are available on the MassIVE submission ( MSV00008263 Creative Commons CC0 1.0 Universal license). The classical MN and FBMN jobs can be accessed at and, respectively.
The MZmine project along with parameters and export files were deposited ( MSV000084095 Creative Commons CC0 1.0 Universal license). LC–MS 2 data for the AGP were downloaded from MassIVE ( MSV000080186 Creative Commons CC0 1.0 Universal license) and processed with MZmine (v2.37). The classical MN and FBMN jobs can be accessed via the GNPS website at and, respectively. dendroides dataset, along with the MZmine project and parameters used, can be accessed on the MassIVE submission ( MSV000080502 Creative Commons CC0 1.0 Universal license). Nature Methods volume 17, pages 905–908 ( 2020) Cite this article Feature-based molecular networking in the GNPS analysis environment